Configure Mongo Databases

Here we will look into creating sample data bases in Mongo for integrating and querying with Data Cafe.

• Import the collections from the csv files

mongoimport –db pathology –collection pathologyData –type csv –headerline –file pathology.csv

mongoimport –db clinical –collection clinicalData –type csv –headerline –file clinical.csv

• Execute mongo commands.

$ mongo

> use pathology

> db.pathologyData.find()

> use clinical

> db.clinicalData.find()

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Have feedback or corrections? Email us at pkathi2@emory.edu.